Note AcademyNote Academy

Chemistry 5070 · Chapter 2

Atoms, Elements and Bonding

Elements, compounds and mixtures, atomic structure and electronic configuration, isotopes and relative atomic mass, ionic bonding, covalent bonding and simple molecules, giant covalent structures, and metallic bonding.

15 min read

2.1 Elements, compounds and mixtures

ElementCompoundMixture
what it isone type of atom onlytwo or more different elements chemically bonded togethertwo or more substances not chemically combined
proportionsnot applicablefixed ratio, shown by its formulaany proportions
propertieshas its own propertiesdifferent from the elements that formed itthe properties of each substance are kept
separationcannot be broken down by chemical meansonly by a chemical reactionby physical methods such as filtration or distillation
examplesiron, oxygen, sodiumwater, carbon dioxide, sodium chlorideair, sea water, steel

Iron and sulfur. A mixture of iron filings and sulfur powder can be separated with a magnet (the iron is attracted), and it can be any proportion of each. If the mixture is heated, the elements react to form the compound iron(II) sulfide, which is a different grey solid that the magnet does not attract. This cannot be separated by physical means.

Fe(s)+S(s)→FeS(s)\ce{Fe(s) + S(s) -> FeS(s)}

2.2 Atomic structure and the Periodic Table

An atom has a very small, dense nucleus in the centre, containing protons and neutrons. The electrons move around the nucleus in shells (energy levels).

ParticleRelative chargeRelative mass
proton+1+111
neutron0011
electron−1-111836\dfrac{1}{1836} (negligible)

An atom is neutral: it has the same number of electrons as protons.

Electronic configuration

Electrons fill the shells nearest the nucleus first. The first shell holds up to 2 electrons, and the second and third shells hold up to 8 each, for the elements with proton number 1 to 20. The arrangement is written as numbers, for example sodium is 2,8,12,8,1.

ElementProton numberConfigurationElementProton numberConfiguration
hydrogen11sodium112,8,1
helium22magnesium122,8,2
lithium32,1aluminium132,8,3
beryllium42,2silicon142,8,4
boron52,3phosphorus152,8,5
carbon62,4sulfur162,8,6
nitrogen72,5chlorine172,8,7
oxygen82,6argon182,8,8
fluorine92,7potassium192,8,8,1
neon102,8calcium202,8,8,2

The electron shells of sodium (2,8,1) and chlorine (2,8,7)

The electron shells of sodium (2,8,1) and chlorine (2,8,7)

The link with the Periodic Table.

  • For Groups I to VII, the number of outer-shell electrons equals the group number. Sodium (2,8,12,8,1) is in Group I, and chlorine (2,8,72,8,7) is in Group VII.
  • The number of occupied shells equals the period number. Sodium has three shells, so it is in Period 3.
  • The Group VIII noble gases have a full outer shell (helium has 22, the others have 88), which is why they are so unreactive.

For an ion, the electronic configuration is that of the atom with the extra electrons added or removed: Na+\text{Na}^+ is 2,82,8, and Cl−\text{Cl}^- is 2,8,82,8,8.

1515 electrons fill the shells as 2,8,52,8,5. There are 55 outer electrons, so it is in Group V, and three shells, so Period 3.

2.3 Isotopes

Isotopes of an element have the same chemical properties, because they have the same number of electrons and therefore the same electronic configuration. Chemical reactions depend on the electrons.

Symbols. An atom or ion is written with the nucleon number at the top and the proton number at the bottom, for example 612C{}^{12}_{6}\text{C} and 1735Cl−{}^{35}_{17}\text{Cl}^{-}.

Protons =17= 17. Neutrons =35−17=18= 35 - 17 = 18. The ion has gained one electron, so electrons =17+1=18= 17 + 1 = 18.

Relative atomic mass

The relative atomic mass, ArA_\text{r}, of an element is the average mass of its isotopes, taking account of how much of each there is, compared with 112\frac{1}{12} of the mass of an atom of carbon-12.

Ar=∑(isotope mass×abundance)100A_\text{r} = \frac{\sum (\text{isotope mass} \times \text{abundance})}{100}

Ar=(35×75)+(37×25)100=2625+925100=35.5A_\text{r} = \frac{(35 \times 75) + (37 \times 25)}{100} = \frac{2625 + 925}{100} = 35.5

2.4 Ions and ionic bonds

An atom becomes an ion when it gains or loses electrons so that it has a full outer shell, the electronic configuration of a noble gas.

  • Metal atoms lose electrons to form positive ions (cations): Na→NaX++eX−\ce{Na -> Na+ + e-}.
  • Non-metal atoms gain electrons to form negative ions (anions): Cl+eX−→ClX−\ce{Cl + e- -> Cl-}.

The charge on the ion depends on the group:

GroupIIIIIIVVIVII
charge on the ion1+1+2+2+3+3+3−3-2−2-1−1-

Ionic bonds form between a metal and a non-metal. The metal atoms transfer electrons to the non-metal atoms.

Sodium chloride. A sodium atom (2,8,12,8,1) gives its one outer electron to a chlorine atom (2,8,72,8,7). Both ions now have a full outer shell: Na+\text{Na}^+ is 2,82,8 and Cl−\text{Cl}^- is 2,8,82,8,8.

A dot-and-cross diagram for sodium chloride: sodium transfers one electron to chlorine, giving Na+ and Cl-

A dot-and-cross diagram for sodium chloride: sodium transfers one electron to chlorine, giving Na+ and Cl-

In a dot-and-cross diagram for an ionic compound, show only the outer shell of each ion, put the ions in square brackets, and write the charge at the top right. For magnesium oxide, magnesium transfers two electrons to oxygen, giving Mg2+\text{Mg}^{2+} and O2−\text{O}^{2-}. For calcium chloride, one calcium atom gives one electron to each of two chlorine atoms, giving Ca2+\text{Ca}^{2+} and two Cl−\text{Cl}^-.

The giant ionic lattice

An ionic compound is a giant lattice: a regular, repeating arrangement of alternating positive and negative ions, held together by strong ionic bonds in every direction.

A giant ionic lattice of alternating positive and negative ions

A giant ionic lattice of alternating positive and negative ions

Properties of ionic compounds

PropertyExplanation
high melting and boiling pointsa large amount of energy is needed to overcome the many strong electrostatic attractions between the oppositely charged ions
do not conduct when solidthe ions are in fixed positions in the lattice and cannot move
conduct when molten or dissolved in water (aqueous)the ions are free to move and carry the charge

2.5 Simple molecules and covalent bonds

Covalent bonds form between non-metal atoms. A molecule is a group of atoms held together by covalent bonds. A single bond is one shared pair, a double bond is two shared pairs, and a triple bond is three shared pairs.

In a dot-and-cross diagram, the outer electrons of one atom are drawn as dots and the other atom's as crosses, and the overlap shows the shared pairs. Outer electrons that are not shared are shown as lone pairs.

Dot-and-cross diagrams for hydrogen, chlorine, water, methane, ammonia, oxygen, nitrogen, carbon dioxide and ethene

Dot-and-cross diagrams for hydrogen, chlorine, water, methane, ammonia, oxygen, nitrogen, carbon dioxide and ethene
MoleculeFormulaBonds shown by the diagram
hydrogenHX2\ce{H2}one single bond
chlorineClX2\ce{Cl2}one single bond, three lone pairs on each atom
hydrogen chlorideHCl\ce{HCl}one single bond
waterHX2O\ce{H2O}two single bonds, two lone pairs on oxygen
methaneCHX4\ce{CH4}four single bonds
ammoniaNHX3\ce{NH3}three single bonds, one lone pair on nitrogen
methanolCHX3OH\ce{CH3OH}three C–H, one C–O and one O–H single bond
oxygenOX2\ce{O2}one double bond
carbon dioxideCOX2\ce{CO2}two double bonds (C=O)
etheneCX2HX4\ce{C2H4}one double bond (C=C) and four C–H single bonds
nitrogenNX2\ce{N2}one triple bond

Hydrogen (11 electron) and chlorine (2,8,72,8,7) share one pair. The shared pair is drawn in the overlap of the two outer shells, and chlorine has three lone pairs (the other 66 outer electrons). Both atoms now have a noble gas configuration: hydrogen has 22 and chlorine has 88.

Properties of simple molecular substances

PropertyExplanation
low melting and boiling pointsthe weak forces between the molecules (intermolecular forces) are easily overcome. The strong covalent bonds inside the molecules are not broken
do not conduct electricitythe molecules have no overall charge, and there are no free ions or electrons to carry charge

2.6 Giant covalent structures

Some covalent substances form a giant covalent structure (macromolecule): a huge network of atoms held together by strong covalent bonds. The three to know are diamond, graphite and silicon(IV) oxide.

The structures of diamond and graphite

The structures of diamond and graphite
DiamondGraphiteSilicon(IV) oxide, SiOX2\ce{SiO2}
structureeach carbon bonded to four others by covalent bonds in a rigid tetrahedral arrangementeach carbon bonded to three others in flat layers of hexagons, with weak forces between the layerseach silicon bonded to four oxygen atoms and each oxygen to two silicon atoms, a structure like diamond
hardnessvery hardsoft and slipperyhard
melting pointvery highvery highvery high
electrical conductivitydoes not conduct (no free electrons)conducts (the fourth electron from each carbon is delocalised and free to move along the layers)does not conduct

Uses related to structure.

  • Diamond is used in cutting tools (drill bits and saws) because it is extremely hard.
  • Graphite is used as a lubricant because the layers can slide over each other easily, as the forces between them are weak.
  • Graphite is used as an electrode (in electrolysis) because it conducts electricity and is unreactive.

Diamond and silicon(IV) oxide have similar properties (hard, very high melting points, do not conduct) because both are giant covalent structures with each atom held by strong covalent bonds to the same number of neighbours.

2.7 Metallic bonding

The metallic lattice: positive ions in rows surrounded by a sea of delocalised electrons

The metallic lattice: positive ions in rows surrounded by a sea of delocalised electrons

The outer electrons of each metal atom leave the atom and move freely through the whole structure. The positive ions are left in a regular lattice.

PropertyExplanation
good electrical conductivitythe delocalised electrons are free to move through the lattice and carry the charge
malleable (can be hammered into shape) and ductile (can be drawn into wires)the layers of positive ions can slide over each other, and the delocalised electrons still hold the structure together

Comparing the structures

StructureParticlesBondingMelting pointConducts?
ionic compoundionsstrong attraction between ionshighwhen molten or aqueous only
simple moleculemoleculesweak forces between moleculeslowno
giant covalent (diamond, SiOX2\ce{SiO2})atomsstrong covalent bonds in a networkvery highno
graphiteatomscovalent in layers, weak between layersvery highyes
metalpositive ions and electronsmetallic bondusually highyes
Test yourself62 flashcards on this chapter.Flashcards →

Practise this chapter

Every past-paper question on these topics, with the mark scheme.